Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929272.1_cds_XP_016476621.1_68432
CDS Infomation

[gene=LOC107798167] [db_xref=GeneID:107798167] [protein=probable protein phosphatase 2C 65] [protein_id=XP_016476621.1] [location=complement(join(67174..67605,68390..68613,68852..68969,69076..69384,70282..70539))] [gbkey=CDS]
Sequence

ATGGGTGCATGTTGTACCTGTCAAAGGGGGCAAAATTTTGAAGGCAAACATCATAATCAC
AATCATAATCATAATCATCATAATTATTATGAGGAAAATAATGGGGAGCAGAAAGAGATT
GAAGATGATTATCAAAGCATAGTAGGAAGAGGAGATTTGGGTGCCAATGTCAGATTATGT
GGATTTTCTAAATTTGTATCAATGTATAGTCAACAAGGTAAAAAGGGGATCAATCAAGAT
GCCATGACTGTTTGGGAGAACTTTGGTGGACAGAAAGGTATGTTCTTCTGTGGTGTTTTT
GATGGACATGGACCCTCCGGCCACAAGGTGGCGCGCTATGTTAGAGATTTCTTACCTTCC
AAAATTTCATCATATAATAATGAGATCAGTACCAACAGTATTAGATGGGATGTCGAAAAG
GATGATAGTGAAGCTGACAACCCATACTTTGTTGCATGGAGAGATAAATTTCTCAAGTCT
TTTAAAGAAATGGATGAAGAACTTGAAGGTGATGGTTCTATTGAAAGTTACTGCAGTGGC
ACGACAGCAGTAACTCTAGTTAAACAGGGAGAACATTTGATAGTTGGAAATTTAGGAGAT
TCTCGCGCTATTATTTGCACCAGGGACGACAAAAATGAGCTCGTTTCTGAACAACTCACA
GTGGACTTGAAACCTAACCTCCCAGCTGAATATGAGAGAATAAGAAGTTGTGAAGGAAGA
GTAATGGCGATGGAGGAAGAGCCAAGTGTATATAGGGTGTGGATGCCGGATCAAGATTGC
CCTGGCCTAGCCATGGCTAGAGCTTTCGGAGATTTTTGCTTGAAAGATTTCGGCCTTATC
TCTGTCCCTGAAGTTTATTATAGAAAGCTTACTGAGAAAGATGAATTCATCGTCTTGGCT
TCAGATGGGTTGTGGGATGTTTTAAGCAACGATGAAGTGATTCGTATAGTAGCAACAGCA
AGGAAGCGATCTATTGCAGCAAGACTGGTGGTGCATCATGCAGTTCGAGCCTGGAAATAC
AAGTACCCGTGTGCCAAGGTCGATGATTGTGCTGTCGTTTGCTTGTTCTTGAAACGCCAA
AGGCCTCTGCTAACGAAATCATTGTCAGAAGTGACTGAACTGAGCTTAAATTACACAGAG
CTAGTGAGCAGTCAAAACTACACCCCCAATTCCAAGATAGATGATGGTCTTGATACACTG
CTAAATTATCAACTCAAGGAAGAAAAAGATCCAAATGTTGTTGCAACTGGACTTAATGAT
GGATCAGGTAATGATCATAACAAGAGTTCGTCAAGGCACGCTCGTTACCTTAGCAGAAGA
AAATCTGCAATGAATTTTTGA

Peptide Sequence

PEP ID

XP_016476621.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 65 [Nicotiana tabacum]
Sequence

MGACCTCQRGQNFEGKHHNHNHNHNHHNYYEENNGEQKEIEDDYQSIVGRGDLGANVRLC
GFSKFVSMYSQQGKKGINQDAMTVWENFGGQKGMFFCGVFDGHGPSGHKVARYVRDFLPS
KISSYNNEISTNSIRWDVEKDDSEADNPYFVAWRDKFLKSFKEMDEELEGDGSIESYCSG
TTAVTLVKQGEHLIVGNLGDSRAIICTRDDKNELVSEQLTVDLKPNLPAEYERIRSCEGR
VMAMEEEPSVYRVWMPDQDCPGLAMARAFGDFCLKDFGLISVPEVYYRKLTEKDEFIVLA
SDGLWDVLSNDEVIRIVATARKRSIAARLVVHHAVRAWKYKYPCAKVDDCAVVCLFLKRQ
RPLLTKSLSEVTELSLNYTELVSSQNYTPNSKIDDGLDTLLNYQLKEEKDPNVVATGLND
GSGNDHNKSSSRHARYLSRRKSAMNF

Transcript Sequence

Gene sequence data has not been registered.